Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473737: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320457' containing sample 'TB_RSA58' from individual '11389/2'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5M spots, 1G bases, 562.1Mb downloads

UUID: 4921c485-926d-4236-82b4-ff82ff144058

Design: Illumina sequencing of Mycobacterium tuberculosis TB_RSA58 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - MRC SA

PRJNA228052 • SRP036978 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TB_RSA58

SAMN02403499 • SRS555329 • All experiments • All runs

Organism: Mycobacterium tuberculosis TB_RSA58

Library:

Name: Pond-320457

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 453839.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5818L

material_type: DNA:DNA Somatic

product_order: PDO-2551

product_part_number: P-MCV-0001

project: G54462

research_project: RP-114

root_sample_id: SM-4PMPV

sample_id: SM-5818L

work_request: 39310

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 13:50:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5M spots, 1G bases, 562.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173312	2,497,810	504.6M	281.4Mb	2014-02-20
SRR1173638	2,495,794	504.2M	280.8Mb	2014-02-20

ID:: 654227

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